Top cofit genes for ECOLIN_RS07985 from Escherichia coli Nissle 1917

murein tripeptide ABC transporter substrate-binding protein MppA
SEED: Periplasmic Murein Peptide-Binding Protein MppA
KEGG: peptide/nickel transport system substrate-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ECOLIN_RS20280		dipeptide ABC transporter substrate-binding protein DppA	0.51	0.52
2	ECOLIN_RS03950		cell division protein CpoB	no	0.48
3	ECOLIN_RS04350		manganase accumulation protein MntS	0.39	0.48
4	ECOLIN_RS22545		cell-envelope stress modulator CpxP	0.54	0.48
5	ECOLIN_RS15735		hypothetical protein	no	0.46
6	ECOLIN_RS03175		YbdK family carboxylate-amine ligase	no	0.45
7	ECOLIN_RS16205		5-formyltetrahydrofolate cyclo-ligase	no	0.44
8	ECOLIN_RS20625		divergent polysaccharide deacetylase family protein	no	0.43
9	ECOLIN_RS13045		ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE	no	0.43
10	ECOLIN_RS02955		glyoxylate carboligase	0.38	0.43
11	ECOLIN_RS23800		two-component system sensor histidine kinase PmrB	no	0.43
12	ECOLIN_RS23350		zinc uptake transcriptional repressor Zur	0.41	0.43
13	ECOLIN_RS09450		MFS transporter	no	0.42
14	ECOLIN_RS20825		ROK family protein	no	0.42
15	ECOLIN_RS14370		Fe-S cluster assembly transcriptional regulator IscR	0.49	0.42
16	ECOLIN_RS02400		exonuclease subunit SbcC	no	0.42
17	ECOLIN_RS21375		4'-phosphopantetheinyl transferase superfamily protein	no	0.41
18	ECOLIN_RS01760		peptidoglycan meso-diaminopimelic acid protein amidase	no	0.41
19	ECOLIN_RS14055		NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase	no	0.41
20	ECOLIN_RS16460		YggL family protein	no	0.41

Or look for negative cofitness