Top cofit genes for ECOLIN_RS00035 from Escherichia coli Nissle 1917

peroxide stress protein YaaA
SEED: UPF0246 protein YaaA
KEGG: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ECOLIN_RS05135		hydrogenase expression/formation protein	0.57	0.54
2	ECOLIN_RS17010		polysaccharide biosynthesis/export family protein	no	0.54
3	ECOLIN_RS17020		capsular polysaccharide biosynthesis protein	no	0.53
4	ECOLIN_RS25595		K5 polysaccharide biosynthesis UDP-glucose dehydrogenase KfiD	0.40	0.53
5	ECOLIN_RS17555		zinc transporter ZupT	no	0.53
6	ECOLIN_RS08170		phosphatase PAP2/dual specificity phosphatase family protein	0.38	0.52
7	ECOLIN_RS18730		DNA-binding transcriptional regulator Fis	0.38	0.52
8	ECOLIN_RS24040		anaerobic C4-dicarboxylate transporter DcuA	no	0.52
9	ECOLIN_RS16475		oxidative damage protection protein	0.68	0.51
10	ECOLIN_RS25600		K5 polysaccharide biosynthesis glycosyltransferase KfiC	no	0.51
11	ECOLIN_RS15185		hydrogenase maturation peptidase HycI	no	0.51
12	ECOLIN_RS21735		UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	no	0.50
13	ECOLIN_RS17025		capsular biosynthesis protein	0.39	0.50
14	ECOLIN_RS20610		rhodanese-like domain-containing protein	no	0.50
15	ECOLIN_RS03625		PTS N-acetyl glucosamine transporter subunit IIABC	no	0.50
16	ECOLIN_RS21740		UDP-N-acetyl-D-mannosamine dehydrogenase	no	0.50
17	ECOLIN_RS14950		L-valine exporter subunit YgaZ	no	0.50
18	ECOLIN_RS04945		aliphatic sulfonate ABC transporter permease SsuC	no	0.49
19	ECOLIN_RS06295		50S ribosomal protein L32	no	0.49
20	ECOLIN_RS17005		capsule polysaccharide export inner-membrane protein KpsE	no	0.49

Or look for negative cofitness