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  • Top cofit genes for CSW01_19575 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter permease
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.83
    2 CSW01_01300 sugar ABC transporter no 0.82
    3 CSW01_14165 fucose 4-O-acetylase no 0.81
    4 CSW01_01345 glycosyl transferase family 1 no 0.80
    5 CSW01_01285 perosamine synthetase no 0.80
    6 CSW01_01310 long-chain fatty acid--CoA ligase no 0.80
    7 CSW01_01275 phosphomannomutase/phosphoglucomutase no 0.80
    8 CSW01_01325 acetyltransferase no 0.80
    9 CSW01_01290 rfbG protein no 0.79
    10 CSW01_01280 GDP-mannose 4,6-dehydratase no 0.79
    11 CSW01_01360 sugar transferase no 0.79
    12 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.79
    13 CSW01_07835 catalase-peroxidase no 0.79
    14 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.79
    15 CSW01_01350 polysaccharide biosynthesis protein no 0.79
    16 CSW01_01320 acyl-CoA reductase no 0.79
    17 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase no 0.79
    18 CSW01_01250 polymerase no 0.79
    19 CSW01_01305 acyl carrier protein no 0.79
    20 CSW01_00215 potassium uptake protein TrkH no 0.79

    Or look for negative cofitness