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  • Top cofit genes for CSW01_19570 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter permease
    SEED: ABC transporter, permease protein
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01040 protein RarD no 0.59
    2 CSW01_14170 AEC family transporter no 0.56
    3 CSW01_17560 DNA-binding response regulator no 0.54
    4 CSW01_01175 formamidopyrimidine-DNA glycosylase no 0.53
    5 CSW01_19550 chemotaxis protein CheA no 0.50
    6 CSW01_14090 NAD(P)-dependent oxidoreductase no 0.50
    7 CSW01_07995 galactose-1-epimerase no 0.49
    8 CSW01_05810 transporter no 0.48
    9 CSW01_05430 GGDEF domain-containing protein no 0.48
    10 CSW01_03155 RNA polymerase-binding transcription factor DksA no 0.48
    11 CSW01_01355 UDP-glucose 4-epimerase no 0.48
    12 CSW01_19285 amino acid ABC transporter substrate-binding protein no 0.48
    13 CSW01_02580 DeoR/GlpR transcriptional regulator no 0.47
    14 CSW01_17555 LacI family transcriptional regulator no 0.47
    15 CSW01_10190 nucleoid-associated protein no 0.47
    16 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC no 0.46
    17 CSW01_06090 formimidoylglutamase no 0.46
    18 CSW01_11395 hydroxyacylglutathione hydrolase no 0.46
    19 CSW01_13595 two-component system sensor histidine kinase CpxA no 0.45
    20 CSW01_19495 type I secretion system permease/ATPase no 0.45

    Or look for negative cofitness