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  • Top cofit genes for CSW01_19565 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter substrate-binding protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18565 L-threonine 3-dehydrogenase 0.49 0.54
    2 CSW01_19525 chemoreceptor glutamine deamidase CheD no 0.46
    3 CSW01_09320 amino acid ABC transporter permease no 0.45
    4 CSW01_09065 GTPase no 0.44
    5 CSW01_13590 DNA-binding response regulator no 0.44
    6 CSW01_13360 argininosuccinate lyase 0.65 0.43
    7 CSW01_02680 WYL domain-containing protein no 0.43
    8 CSW01_10795 NAD(P)H:quinone oxidoreductase no 0.42
    9 CSW01_18660 glycerate kinase 0.27 0.42
    10 CSW01_11835 tRNA-binding protein no 0.42
    11 CSW01_02590 ABC transporter substrate-binding protein no 0.42
    12 CSW01_04375 SsrA-binding protein no 0.41
    13 CSW01_14355 DUF1566 domain-containing protein no 0.41
    14 CSW01_08750 1-aminocyclopropane-1-carboxylate deaminase no 0.41
    15 CSW01_19150 EamA family transporter 0.25 0.41
    16 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase no 0.40
    17 CSW01_14745 peptidase M66 no 0.40
    18 CSW01_11955 endonuclease no 0.39
    19 CSW01_01400 HlyC/CorC family transporter no 0.39
    20 CSW01_14590 type IV secretion protein DotU no 0.38

    Or look for negative cofitness