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Cofit
Protein
Homologs
Top cofit genes for CSW01_19490 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_11825
zinc transporter ZntB
0.62
0.87
2
CSW01
_01300
sugar ABC transporter
no
0.87
3
CSW01
_01295
ABC transporter permease
no
0.87
4
CSW01
_11710
transcriptional regulator
no
0.87
5
CSW01
_14125
1,4-alpha-glucan branching enzyme
no
0.85
6
CSW01
_12330
ADP-ribose diphosphatase
no
0.85
7
CSW01
_01275
phosphomannomutase/phosphoglucomutase
no
0.85
8
CSW01
_01315
NAD-dependent alcohol dehydrogenase
no
0.84
9
CSW01
_01345
glycosyl transferase family 1
0.88
0.84
10
CSW01
_01285
perosamine synthetase
0.67
0.84
11
CSW01
_01290
rfbG protein
no
0.84
12
CSW01
_01310
long-chain fatty acid--CoA ligase
no
0.84
13
CSW01
_00215
potassium uptake protein TrkH
0.39
0.84
14
CSW01
_01320
acyl-CoA reductase
no
0.84
15
CSW01
_01280
GDP-mannose 4,6-dehydratase
0.87
0.84
16
CSW01
_01250
polymerase
no
0.84
17
CSW01
_01260
polysaccharide deacetylase
no
0.83
18
CSW01
_01325
acetyltransferase
no
0.83
19
CSW01
_01305
acyl carrier protein
no
0.83
20
CSW01
_01350
polysaccharide biosynthesis protein
0.77
0.83
Or look for
negative cofitness