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  • Top cofit genes for CSW01_19480 from Vibrio cholerae E7946 ATCC 55056

    HlyD family type I secretion periplasmic adaptor subunit
    SEED: Type I secretion system, membrane fusion protein LapC

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15015 anaerobic C4-dicarboxylate transporter no 0.55
    2 CSW01_08790 mechanosensitive ion channel protein MscS no 0.51
    3 CSW01_16980 hypothetical protein no 0.50
    4 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase 0.46 0.49
    5 CSW01_19260 methyl-accepting chemotaxis protein no 0.47
    6 CSW01_19280 amino acid ABC transporter permease no 0.47
    7 CSW01_10465 DUF1853 domain-containing protein no 0.46
    8 CSW01_02650 IS5/IS1182 family transposase no 0.46
    9 CSW01_14590 type IV secretion protein DotU no 0.46
    10 CSW01_14570 type VI secretion system baseplate subunit TssG no 0.46
    11 CSW01_14365 methyl-accepting chemotaxis protein no 0.46
    12 CSW01_18495 cytochrome bd-I oxidase subunit CydX no 0.46
    13 CSW01_14775 Na+/H+ antiporter subunit D 0.30 0.44
    14 CSW01_04175 SWIM zinc finger domain-containing protein no 0.44
    15 CSW01_00045 amino acid ABC transporter permease 0.23 0.44
    16 CSW01_18085 ABC transporter no 0.44
    17 CSW01_19365 LysR family transcriptional regulator no 0.44
    18 CSW01_05700 DUF2878 domain-containing protein no 0.43
    19 CSW01_19035 alpha-hydroxy-acid oxidizing enzyme no 0.42
    20 CSW01_18180 serine protease no 0.42

    Or look for negative cofitness