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  • Top cofit genes for CSW01_19400 from Vibrio cholerae E7946 ATCC 55056

    putrescine-ornithine antiporter
    SEED: Putrescine/proton symporter, putrescine/ornithine antiporter PotE
    KEGG: putrescine:ornithine antiporter

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06730 GntR family transcriptional regulator 0.21 0.66
    2 CSW01_16660 hypothetical protein no 0.64
    3 CSW01_01175 formamidopyrimidine-DNA glycosylase no 0.64
    4 CSW01_13860 nitrogen regulation protein NR(II) no 0.62
    5 CSW01_00040 amino acid ABC transporter ATP-binding protein 0.47 0.61
    6 CSW01_04340 M23 family peptidase no 0.60
    7 CSW01_19630 spermidine/putrescine ABC transporter substrate-binding protein no 0.60
    8 CSW01_09060 DUF2787 domain-containing protein no 0.60
    9 CSW01_02670 hypothetical protein no 0.60
    10 CSW01_07970 alpha-acetolactate decarboxylase no 0.59
    11 CSW01_10045 sodium-dependent transporter no 0.59
    12 CSW01_04570 exodeoxyribonuclease 7 small subunit no 0.58
    13 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.45 0.58
    14 CSW01_10355 phosphohistidine phosphatase SixA no 0.58
    15 CSW01_05020 regulatory protein ToxS no 0.58
    16 CSW01_00980 hypothetical protein no 0.58
    17 CSW01_14165 fucose 4-O-acetylase no 0.57
    18 CSW01_14350 proconvertase P-domain protein no 0.57
    19 CSW01_11825 zinc transporter ZntB 0.44 0.57
    20 CSW01_13960 potassium uptake protein TrkH no 0.56

    Or look for negative cofitness