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Cofit
Protein
Homologs
Top cofit genes for CSW01_19115 from
Vibrio cholerae E7946 ATCC 55056
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_15220
alpha-amylase
no
0.59
2
CSW01
_14565
type VI secretion system baseplate subunit TssF
0.20
0.57
3
CSW01
_14960
hypothetical protein
no
0.56
4
CSW01
_18695
energy transducer TonB
no
0.55
5
CSW01
_04010
vibriobactin biosynthesis isochorismate synthase
no
0.54
6
CSW01
_08640
envelope biogenesis factor ElyC
no
0.54
7
CSW01
_06840
amino acid ABC transporter ATP-binding protein
0.16
0.53
8
CSW01
_04205
type II toxin-antitoxin system HipA family toxin
no
0.52
9
CSW01
_15200
PTS ascorbate transporter subunit IIC
no
0.52
10
CSW01
_04655
HTH-type transcriptional regulator TreR
no
0.51
11
CSW01
_12050
adenosylcobinamide-phosphate synthase
0.36
0.51
12
CSW01
_18170
inosine/guanosine kinase
no
0.51
13
CSW01
_02230
ribonuclease E inhibitor RraB
no
0.51
14
CSW01
_18840
hypothetical protein
no
0.50
15
CSW01
_18260
hypothetical protein
no
0.50
16
CSW01
_16855
CAI-1 autoinducer synthase
no
0.50
17
CSW01
_14665
ribokinase
no
0.50
18
CSW01
_00870
cytochrome c5 family protein
no
0.50
19
CSW01
_01975
chemotaxis protein CheX
no
0.49
20
CSW01
_06810
hypothetical protein
no
0.49
Or look for
negative cofitness