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  • Top cofit genes for CSW01_19070 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03240 chitobiase no 0.68
    2 CSW01_03760 phosphate regulon transcriptional regulatory protein PhoB no 0.57
    3 CSW01_12700 RNA pseudouridine synthase 0.25 0.57
    4 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.57
    5 CSW01_06835 BAX inhibitor protein no 0.54
    6 CSW01_05945 type 1 glutamine amidotransferase no 0.54
    7 CSW01_07090 type VI secretion system tube protein Hcp no 0.53
    8 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.34 0.53
    9 CSW01_18300 LysR family transcriptional regulator no 0.53
    10 CSW01_01750 transporter no 0.53
    11 CSW01_11135 hypothetical protein no 0.52
    12 CSW01_01915 bacterioferritin-associated ferredoxin no 0.52
    13 CSW01_08380 TIGR01621 family pseudouridine synthase no 0.51
    14 CSW01_02380 tRNA-Asn no 0.51
    15 CSW01_17395 hypothetical protein no 0.51
    16 CSW01_19125 branched-chain amino acid ABC transporter 0.36 0.50
    17 CSW01_07025 hypothetical protein no 0.50
    18 CSW01_12610 3-isopropylmalate dehydratase small subunit 0.33 0.50
    19 CSW01_05235 GGDEF domain-containing protein no 0.50
    20 CSW01_04765 hypothetical protein no 0.49

    Or look for negative cofitness