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  • Top cofit genes for CSW01_19025 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Predicted Lactate-responsive regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14885 NupC/NupG family nucleoside CNT transporter no 0.58
    2 CSW01_08265 methyl-accepting chemotaxis protein no 0.57
    3 CSW01_11965 threonine synthase 0.43 0.53
    4 CSW01_15420 glyoxalase no 0.52
    5 CSW01_05900 carboxy-S-adenosyl-L-methionine synthase CmoA no 0.52
    6 CSW01_17865 conjugal transfer protein TraF no 0.51
    7 CSW01_11565 transcriptional regulator NrdR 0.51 0.49
    8 CSW01_15910 hypothetical protein no 0.47
    9 CSW01_18275 diaminobutyrate--2-oxoglutarate transaminase no 0.47
    10 CSW01_03230 beta-N-acetylhexosaminidase no 0.47
    11 CSW01_09980 D-hexose-6-phosphate mutarotase 0.39 0.47
    12 CSW01_09275 hypothetical protein no 0.46
    13 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.75 0.46
    14 CSW01_12685 DNA polymerase III subunit chi no 0.45
    15 CSW01_02565 oxidative stress defense protein no 0.44
    16 CSW01_15230 glycosyl hydrolase no 0.44
    17 CSW01_12965 uroporphyrinogen-III C-methyltransferase 0.39 0.44
    18 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.19 0.44
    19 CSW01_18095 enoyl-[acyl-carrier-protein] reductase FabV no 0.43
    20 CSW01_10245 ABC transporter 0.42 0.43

    Or look for negative cofitness