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  • Top cofit genes for CSW01_18925 from Vibrio cholerae E7946 ATCC 55056

    sensor domain-containing diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18710 hemin ABC transporter substrate-binding protein no 0.66
    2 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.65
    3 CSW01_07235 hypothetical protein no 0.65
    4 CSW01_08035 DUF2726 domain-containing protein no 0.64
    5 CSW01_11240 flagella basal body P-ring formation protein FlgA no 0.62
    6 CSW01_08660 PurR family transcriptional regulator no 0.62
    7 CSW01_10630 flagella biosynthesis chaperone FliJ no 0.61
    8 CSW01_01975 chemotaxis protein CheX no 0.60
    9 CSW01_08730 phage-shock protein no 0.59
    10 CSW01_11195 flagellar L-ring protein no 0.59
    11 CSW01_11190 flagellar P-ring protein no 0.59
    12 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ no 0.59
    13 CSW01_12845 metalloprotease PmbA no 0.58
    14 CSW01_14665 ribokinase no 0.58
    15 CSW01_12735 RidA family protein no 0.57
    16 CSW01_04580 flagellar motor protein MotB 0.42 0.57
    17 CSW01_10700 flagellin D no 0.57
    18 CSW01_10350 flagellar biosynthesis protein FlhA 0.41 0.56
    19 CSW01_10665 PAS domain-containing sensor histidine kinase 0.40 0.56
    20 CSW01_11205 flagellar basal-body rod protein FlgF no 0.56

    Or look for negative cofitness