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  • Top cofit genes for CSW01_18825 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: sensory box/GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10655 flagellar hook-basal body complex protein FliE no 0.66
    2 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin no 0.65
    3 CSW01_03505 hypothetical protein no 0.62
    4 CSW01_05610 sensor domain-containing diguanylate cyclase no 0.61
    5 CSW01_03755 recombination-associated protein RdgC no 0.60
    6 CSW01_18755 flavodoxin no 0.60
    7 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.26 0.60
    8 CSW01_09180 quinolinate synthase no 0.60
    9 CSW01_16130 acetyltransferase no 0.59
    10 CSW01_12610 3-isopropylmalate dehydratase small subunit 0.31 0.59
    11 CSW01_02725 methyl-accepting chemotaxis protein no 0.59
    12 CSW01_08765 TetR/AcrR family transcriptional regulator no 0.59
    13 CSW01_03920 peptidase B no 0.58
    14 CSW01_07540 MCE family protein no 0.58
    15 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP no 0.58
    16 CSW01_05060 cation:proton antiporter no 0.58
    17 CSW01_00860 TetR/AcrR family transcriptional regulator no 0.58
    18 CSW01_06735 methylisocitrate lyase no 0.57
    19 CSW01_14985 DUF3696 domain-containing protein no 0.57
    20 CSW01_07135 chromosome partitioning protein ParA no 0.57

    Or look for negative cofitness