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  • Top cofit genes for CSW01_18795 from Vibrio cholerae E7946 ATCC 55056

    cold-shock protein CspV
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06115 elongation factor P-like protein YeiP 0.53 0.61
    2 CSW01_16395 type II toxin-antitoxin system RelE/ParE family toxin 0.28 0.58
    3 CSW01_06585 fumarate hydratase 0.32 0.56
    4 CSW01_18170 inosine/guanosine kinase no 0.53
    5 CSW01_11045 head protein no 0.50
    6 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM no 0.50
    7 CSW01_08060 two-component system response regulator no 0.50
    8 CSW01_10035 YnhF family membrane protein no 0.50
    9 CSW01_07705 sterol desaturase family protein no 0.50
    10 CSW01_02680 WYL domain-containing protein no 0.49
    11 CSW01_11630 DUF2884 domain-containing protein no 0.49
    12 CSW01_10125 maf-like protein no 0.47
    13 CSW01_04255 toxin coregulated pilus biosynthesis protein P no 0.47
    14 CSW01_10995 hypothetical protein no 0.47
    15 CSW01_18590 LysR family transcriptional regulator no 0.46
    16 CSW01_06235 hypothetical protein no 0.46
    17 CSW01_19395 histidine kinase no 0.46
    18 CSW01_12985 ElaA protein 0.36 0.45
    19 CSW01_17865 conjugal transfer protein TraF no 0.45
    20 CSW01_06660 two-component sensor histidine kinase no 0.45

    Or look for negative cofitness