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  • Top cofit genes for CSW01_18670 from Vibrio cholerae E7946 ATCC 55056

    CdaR family transcriptional regulator
    SEED: Sugar diacid utilization regulator SdaR
    KEGG: carbohydrate diacid regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11625 diguanylate cyclase no 0.57
    2 CSW01_06390 thiol oxidoreductase no 0.55
    3 CSW01_16960 DUF475 domain-containing protein 0.38 0.53
    4 CSW01_18690 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW no 0.53
    5 CSW01_08070 hypothetical protein no 0.52
    6 CSW01_15095 protease no 0.52
    7 CSW01_09940 formyltetrahydrofolate deformylase 0.35 0.52
    8 CSW01_10690 protein FlaG no 0.51
    9 CSW01_17190 DNA mismatch repair protein MutT no 0.51
    10 CSW01_11555 riboflavin synthase no 0.51
    11 CSW01_05535 histidine kinase no 0.51
    12 CSW01_06380 GTP cyclohydrolase II no 0.50
    13 CSW01_11250 molecular chaperone no 0.50
    14 CSW01_17790 3-hydroxy-3-methylglutaryl-CoA reductase no 0.50
    15 CSW01_18195 DUF3024 domain-containing protein no 0.49
    16 CSW01_00690 homoserine/homoserine lactone efflux protein no 0.48
    17 CSW01_18935 DUF3541 domain-containing protein no 0.48
    18 CSW01_13445 elongation factor P no 0.48
    19 CSW01_10410 zinc ABC transporter permease 0.23 0.48
    20 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase no 0.47

    Or look for negative cofitness