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Cofit
Protein
Homologs
Top cofit genes for CSW01_18375 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_12385
multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
no
0.57
2
CSW01
_06940
hypothetical protein
no
0.56
3
CSW01
_16075
hypothetical protein
no
0.56
4
CSW01
_12750
BolA family transcriptional regulator
no
0.55
5
CSW01
_13210
TIGR02444 family protein
no
0.52
6
CSW01
_08785
DUF4056 domain-containing protein
no
0.52
7
CSW01
_02235
hypothetical protein
no
0.51
8
CSW01
_11235
chemotaxis protein CheV
no
0.51
9
CSW01
_09170
histidine kinase
no
0.50
10
CSW01
_19320
mannitol-1-phosphate 5-dehydrogenase
no
0.50
11
CSW01
_17050
histidine kinase
no
0.50
12
CSW01
_07585
formate dehydrogenase subunit gamma
no
0.49
13
CSW01
_12375
general secretion pathway protein GspB
no
0.49
14
CSW01
_08260
hypothetical protein
no
0.49
15
CSW01
_14135
type VI secretion system tube protein Hcp
no
0.48
16
CSW01
_14510
oxidoreductase
no
0.48
17
CSW01
_09555
tRNA-(ms[2]io[6]A)-hydroxylase
no
0.48
18
CSW01
_08000
galactokinase
no
0.48
19
CSW01
_07510
hypothetical protein
no
0.48
20
CSW01
_04555
tRNA pseudouridine(65) synthase TruC
0.41
0.47
Or look for
negative cofitness