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  • Top cofit genes for CSW01_18375 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12385 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase no 0.57
    2 CSW01_06940 hypothetical protein no 0.56
    3 CSW01_16075 hypothetical protein no 0.56
    4 CSW01_12750 BolA family transcriptional regulator no 0.55
    5 CSW01_13210 TIGR02444 family protein no 0.52
    6 CSW01_08785 DUF4056 domain-containing protein no 0.52
    7 CSW01_02235 hypothetical protein no 0.51
    8 CSW01_11235 chemotaxis protein CheV no 0.51
    9 CSW01_09170 histidine kinase no 0.50
    10 CSW01_19320 mannitol-1-phosphate 5-dehydrogenase no 0.50
    11 CSW01_17050 histidine kinase no 0.50
    12 CSW01_07585 formate dehydrogenase subunit gamma no 0.49
    13 CSW01_12375 general secretion pathway protein GspB no 0.49
    14 CSW01_08260 hypothetical protein no 0.49
    15 CSW01_14135 type VI secretion system tube protein Hcp no 0.48
    16 CSW01_14510 oxidoreductase no 0.48
    17 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase no 0.48
    18 CSW01_08000 galactokinase no 0.48
    19 CSW01_07510 hypothetical protein no 0.48
    20 CSW01_04555 tRNA pseudouridine(65) synthase TruC 0.41 0.47

    Or look for negative cofitness