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  • Top cofit genes for CSW01_18150 from Vibrio cholerae E7946 ATCC 55056

    transcription initiation factor TFIIIB
    SEED: COG1405: Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10270 cytochrome c-type biogenesis protein CcmE no 0.80
    2 CSW01_00450 SCP2 domain-containing protein no 0.72
    3 CSW01_14080 DUF3283 domain-containing protein no 0.72
    4 CSW01_09755 cytochrome C no 0.72
    5 CSW01_18970 DUF2850 domain-containing protein no 0.71
    6 CSW01_01875 hypothetical protein no 0.71
    7 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase no 0.71
    8 CSW01_16655 hypothetical protein no 0.70
    9 CSW01_18935 DUF3541 domain-containing protein no 0.70
    10 CSW01_16835 catabolite repressor/activator no 0.70
    11 CSW01_02455 YggS family pyridoxal phosphate enzyme no 0.70
    12 CSW01_18335 sugar O-acetyltransferase no 0.70
    13 CSW01_10080 4-amino-4-deoxychorismate lyase no 0.70
    14 CSW01_09815 TetR/AcrR family transcriptional regulator no 0.69
    15 CSW01_14720 sigma-54-dependent Fis family transcriptional regulator no 0.68
    16 CSW01_01485 transcriptional regulator no 0.68
    17 CSW01_18480 PLP-dependent aminotransferase family protein no 0.68
    18 CSW01_05940 anthranilate phosphoribosyltransferase no 0.68
    19 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) no 0.67
    20 CSW01_18350 cell division protein DedD no 0.67

    Or look for negative cofitness