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  • Top cofit genes for CSW01_17760 from Vibrio cholerae E7946 ATCC 55056

    DNA helicase IV
    SEED: DNA helicase IV
    KEGG: DNA helicase IV

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15000 rfbP protein no 0.75
    2 CSW01_01040 protein RarD no 0.73
    3 CSW01_11825 zinc transporter ZntB no 0.73
    4 CSW01_08190 ABC transporter permease no 0.70
    5 CSW01_02835 RNA polymerase sigma factor RpoS 0.74 0.70
    6 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 no 0.70
    7 CSW01_06865 Cof-type HAD-IIB family hydrolase 0.24 0.70
    8 CSW01_19140 organic hydroperoxide resistance protein no 0.69
    9 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.69
    10 CSW01_10325 protein phosphatase CheZ no 0.67
    11 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.66
    12 CSW01_19490 GGDEF domain-containing protein no 0.66
    13 CSW01_01260 polysaccharide deacetylase no 0.66
    14 CSW01_13615 GGDEF domain-containing protein no 0.65
    15 CSW01_18205 dehydratase no 0.65
    16 CSW01_01250 polymerase no 0.65
    17 CSW01_01300 sugar ABC transporter 0.54 0.65
    18 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.65
    19 CSW01_11710 transcriptional regulator no 0.65
    20 CSW01_02840 DNA mismatch repair protein MutS 0.83 0.65

    Or look for negative cofitness