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  • Top cofit genes for CSW01_17660 from Vibrio cholerae E7946 ATCC 55056

    protein translocase subunit SecD
    SEED: Protein-export membrane protein SecD (TC 3.A.5.1.1)
    KEGG: preprotein translocase subunit SecD

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08535 TIGR02647 family protein no 0.56
    2 CSW01_05370 YbaB/EbfC family nucleoid-associated protein no 0.55
    3 CSW01_07005 hypothetical protein no 0.53
    4 CSW01_18600 PepSY domain-containing protein no 0.52
    5 CSW01_04445 hypothetical protein no 0.50
    6 CSW01_16120 N-acetyltransferase no 0.50
    7 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I no 0.47
    8 CSW01_17980 arginine ABC transporter ATP-binding protein ArtP no 0.47
    9 CSW01_14765 cation:proton antiporter no 0.45
    10 CSW01_08420 efflux RND transporter periplasmic adaptor subunit no 0.45
    11 CSW01_10480 histidine kinase no 0.45
    12 CSW01_15080 methyl-accepting chemotaxis protein HlyB no 0.44
    13 CSW01_14800 transposase no 0.44
    14 CSW01_13715 pimeloyl-[acyl-carrier protein] methyl ester esterase no 0.44
    15 CSW01_06775 4-hydroxyphenylpyruvate dioxygenase no 0.43
    16 CSW01_17635 class I poly(R)-hydroxyalkanoic acid synthase no 0.43
    17 CSW01_01105 hypothetical protein no 0.42
    18 CSW01_17020 hypothetical protein no 0.42
    19 CSW01_11050 terminase no 0.40
    20 CSW01_06675 (Na+)-NQR maturation NqrM no 0.40

    Or look for negative cofitness