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  • Top cofit genes for CSW01_17560 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding response regulator
    SEED: Nitrate/nitrite response regulator protein
    KEGG: two-component system, NarL family, nitrate/nitrite response regulator NarP

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14600 AAA family ATPase no 0.57
    2 CSW01_14555 type VI secretion system contractile sheath large subunit no 0.57
    3 CSW01_00330 fluoride efflux transporter CrcB no 0.56
    4 CSW01_19570 ABC transporter permease no 0.54
    5 CSW01_19140 organic hydroperoxide resistance protein no 0.53
    6 CSW01_14470 DUF134 domain-containing protein no 0.52
    7 CSW01_08990 glyoxalase no 0.52
    8 CSW01_17380 LysR family transcriptional regulator no 0.52
    9 CSW01_16085 hypothetical protein no 0.50
    10 CSW01_17780 hypothetical protein no 0.50
    11 CSW01_16195 DUF645 domain-containing protein no 0.50
    12 CSW01_14115 glycogen/starch/alpha-glucan phosphorylase 0.62 0.50
    13 CSW01_01040 protein RarD no 0.49
    14 CSW01_17385 antibiotic biosynthesis monooxygenase no 0.49
    15 CSW01_19415 hypothetical protein no 0.49
    16 CSW01_11695 peptidyl-prolyl cis-trans isomerase 0.17 0.48
    17 CSW01_09535 alanine dehydrogenase no 0.48
    18 CSW01_17400 AcrB/AcrD/AcrF family protein no 0.48
    19 CSW01_15310 exoribonuclease R no 0.48
    20 CSW01_14340 S9 family peptidase 0.22 0.48

    Or look for negative cofitness