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  • Top cofit genes for CSW01_17380 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19040 FAD-binding oxidoreductase 0.64 0.60
    2 CSW01_19550 chemotaxis protein CheA 0.52 0.59
    3 CSW01_08395 cardiolipin synthase no 0.57
    4 CSW01_08990 glyoxalase no 0.57
    5 CSW01_02620 inovirus Gp2 family protein no 0.56
    6 CSW01_18390 sensor histidine kinase no 0.56
    7 CSW01_02440 YggU family protein no 0.55
    8 CSW01_19355 rhodanese-like domain-containing protein no 0.55
    9 CSW01_15955 DUF3709 domain-containing protein no 0.55
    10 CSW01_17400 AcrB/AcrD/AcrF family protein no 0.54
    11 CSW01_14515 rhodanese-like domain-containing protein no 0.53
    12 CSW01_16840 exonuclease sbcCD subunit D no 0.52
    13 CSW01_14170 AEC family transporter 0.33 0.52
    14 CSW01_17560 DNA-binding response regulator no 0.52
    15 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.51
    16 CSW01_14555 type VI secretion system contractile sheath large subunit 0.31 0.50
    17 CSW01_19575 ABC transporter permease no 0.50
    18 CSW01_18510 D-serine dehydratase no 0.50
    19 CSW01_00980 hypothetical protein no 0.50
    20 CSW01_17090 SPOR domain-containing protein no 0.50

    Or look for negative cofitness