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  • Top cofit genes for CSW01_17340 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA methyltransferase
    SEED: RRNA methylase, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13700 transcription elongation factor GreB no 0.58
    2 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no 0.55
    3 CSW01_00735 DUF1145 domain-containing protein no 0.50
    4 CSW01_09800 lipoprotein no 0.49
    5 CSW01_12095 hypothetical protein no 0.48
    6 CSW01_07010 chemotaxis protein CheA no 0.47
    7 CSW01_17515 beta-phosphoglucomutase family hydrolase no 0.47
    8 CSW01_14680 aminotransferase no 0.47
    9 CSW01_18315 methyltransferase no 0.46
    10 CSW01_11340 GGDEF domain-containing protein no 0.46
    11 CSW01_13610 membrane protein FxsA 0.37 0.44
    12 CSW01_11835 tRNA-binding protein no 0.44
    13 CSW01_07325 hypothetical protein no 0.44
    14 CSW01_17545 MFS transporter no 0.43
    15 CSW01_19280 amino acid ABC transporter permease no 0.43
    16 CSW01_02375 methyl-accepting chemotaxis protein no 0.42
    17 CSW01_08300 response regulator no 0.42
    18 CSW01_07310 enterotoxin no 0.42
    19 CSW01_12515 DUF1107 domain-containing protein no 0.41
    20 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR no 0.40

    Or look for negative cofitness