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  • Top cofit genes for CSW01_17315 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding protein
    SEED: Transcriptional regulator, SorC family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13180 isoaspartyl peptidase/L-asparaginase no 0.58
    2 CSW01_09550 DNA repair protein no 0.57
    3 CSW01_00870 cytochrome c5 family protein no 0.55
    4 CSW01_00210 DUF3157 domain-containing protein no 0.55
    5 CSW01_00930 SPOR domain-containing protein no 0.53
    6 CSW01_15095 protease no 0.53
    7 CSW01_06290 vitamin B12 import ATP-binding protein BtuD no 0.53
    8 CSW01_06230 LrgB family protein no 0.52
    9 CSW01_04810 VanZ family protein no 0.52
    10 CSW01_01570 hypothetical protein no 0.52
    11 CSW01_15295 aspartate aminotransferase family protein no 0.52
    12 CSW01_11970 homoserine kinase no 0.52
    13 CSW01_06570 serine transporter no 0.52
    14 CSW01_19470 helix-turn-helix transcriptional regulator no 0.51
    15 CSW01_04655 HTH-type transcriptional regulator TreR 0.46 0.51
    16 CSW01_08640 envelope biogenesis factor ElyC no 0.51
    17 CSW01_07235 hypothetical protein no 0.51
    18 CSW01_07625 sulfurtransferase FdhD 0.65 0.51
    19 CSW01_03240 chitobiase no 0.50
    20 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase no 0.50

    Or look for negative cofitness