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  • Top cofit genes for CSW01_17180 from Vibrio cholerae E7946 ATCC 55056

    peptide ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07655 ABC transporter ATP-binding protein 0.56 0.56
    2 CSW01_02770 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.50
    3 CSW01_07330 colonization factor no 0.49
    4 CSW01_12315 esterase YqiA 0.65 0.49
    5 CSW01_06430 ABC transporter substrate-binding protein no 0.48
    6 CSW01_07840 LysR family transcriptional regulator 0.38 0.47
    7 CSW01_18960 quercetin 2,3-dioxygenase 0.66 0.46
    8 CSW01_18270 L-ectoine synthase no 0.45
    9 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.65 0.45
    10 CSW01_14395 oxidoreductase no 0.44
    11 CSW01_07675 amino acid ABC transporter no 0.43
    12 CSW01_07905 DUF2127 domain-containing protein no 0.43
    13 CSW01_06450 histidine kinase no 0.42
    14 CSW01_04770 hemolysin no 0.42
    15 CSW01_08405 DNA-3-methyladenine glycosylase I no 0.42
    16 CSW01_14680 aminotransferase no 0.42
    17 CSW01_00795 alkaline serine protease no 0.41
    18 CSW01_08425 envelope stress response membrane protein PspC no 0.41
    19 CSW01_15255 copper-binding protein no 0.41
    20 CSW01_03065 ClpXP protease specificity-enhancing factor 0.26 0.41

    Or look for negative cofitness