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  • Top cofit genes for CSW01_17170 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter ATP-binding protein
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19535 methyl-accepting chemotaxis protein no 0.58
    2 CSW01_15290 methyl-accepting chemotaxis protein no 0.56
    3 CSW01_14965 hypothetical protein no 0.56
    4 CSW01_07805 DeoR/GlpR transcriptional regulator no 0.54
    5 CSW01_15920 DUF3265 domain-containing protein no 0.54
    6 CSW01_19405 ornithine decarboxylase SpeF no 0.54
    7 CSW01_19235 glycogen debranching enzyme GlgX 0.79 0.51
    8 CSW01_17690 NADH-dependent alcohol dehydrogenase no 0.51
    9 CSW01_04520 aminobenzoyl-glutamate transporter no 0.49
    10 CSW01_04715 serine acetyltransferase no 0.48
    11 CSW01_17260 noncanonical pyrimidine nucleotidase, YjjG family no 0.48
    12 CSW01_08530 RNA helicase no 0.48
    13 CSW01_02650 IS5/IS1182 family transposase no 0.48
    14 CSW01_13215 hydrolase no 0.48
    15 CSW01_08600 hypothetical protein no 0.48
    16 CSW01_18100 sensor domain-containing phosphodiesterase no 0.47
    17 CSW01_01710 Rsd/AlgQ family anti-sigma factor no 0.47
    18 CSW01_15190 L-ribulose-5-phosphate 4-epimerase 0.69 0.47
    19 CSW01_15730 VOC family protein no 0.47
    20 CSW01_02440 YggU family protein no 0.46

    Or look for negative cofitness