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  • Top cofit genes for CSW01_17100 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15155 phosphoribosyl-AMP cyclohydrolase no 0.69
    2 CSW01_17885 hypothetical protein no 0.66
    3 CSW01_09035 IclR family transcriptional regulator no 0.65
    4 CSW01_09750 molybdopterin guanine dinucleotide-containing S/N-oxide reductase 0.53 0.64
    5 CSW01_06395 iron-regulated protein A 0.30 0.64
    6 CSW01_02450 pyrroline-5-carboxylate reductase 0.48 0.64
    7 CSW01_07115 DUF2931 domain-containing protein no 0.64
    8 CSW01_07085 carboxypeptidase M32 no 0.63
    9 CSW01_03205 iron ABC transporter substrate-binding protein no 0.63
    10 CSW01_10265 c-type cytochrome biogenesis protein CcmF no 0.63
    11 CSW01_13805 Hsp33 family molecular chaperone HslO 0.45 0.62
    12 CSW01_01485 transcriptional regulator 0.38 0.62
    13 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.62
    14 CSW01_19215 glucosamine-6-phosphate deaminase 0.23 0.62
    15 CSW01_05950 anthranilate synthase component I 0.35 0.62
    16 CSW01_10260 thiol:disulfide interchange protein DsbE no 0.62
    17 CSW01_17345 prepilin peptidase no 0.62
    18 CSW01_04040 ABC transporter ATP-binding protein 0.43 0.61
    19 CSW01_09455 hemolysin no 0.61
    20 CSW01_04780 hypothetical protein no 0.61

    Or look for negative cofitness