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Cofit
Protein
Homologs
Top cofit genes for CSW01_17065 from
Vibrio cholerae E7946 ATCC 55056
conjugal transfer protein TraF
SEED: TraF-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_11580
sigma factor-binding protein Crl
no
0.64
2
CSW01
_14340
S9 family peptidase
no
0.62
3
CSW01
_02440
YggU family protein
no
0.62
4
CSW01
_03820
hydrogen peroxide-inducible genes activator
no
0.61
5
CSW01
_16320
VOC family protein
no
0.61
6
CSW01
_12955
sulfate adenylyltransferase
no
0.61
7
CSW01
_08170
aminotransferase class III
no
0.60
8
CSW01
_11300
copper-exporting P-type ATPase A
no
0.58
9
CSW01
_05180
tRNA-Asn
no
0.58
10
CSW01
_15345
XRE family transcriptional regulator
no
0.57
11
CSW01
_07835
catalase-peroxidase
no
0.57
12
CSW01
_11720
ATP-dependent protease
no
0.57
13
CSW01
_02275
arginine:ornithine antiporter
no
0.57
14
CSW01
_04595
DUF423 domain-containing protein
no
0.56
15
CSW01
_13860
nitrogen regulation protein NR(II)
no
0.56
16
CSW01
_18060
allophanate hydrolase
no
0.56
17
CSW01
_01480
phosphogluconate dehydratase
no
0.55
18
CSW01
_07510
hypothetical protein
no
0.55
19
CSW01
_13225
phosphoribulokinase
no
0.55
20
CSW01
_11275
NADPH-dependent ferric siderophore reductase
no
0.54
Or look for
negative cofitness