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  • Top cofit genes for CSW01_17025 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: GGDEF domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18835 acyl-CoA thioesterase no 0.68
    2 CSW01_18885 helix-turn-helix transcriptional regulator no 0.66
    3 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP no 0.66
    4 CSW01_06835 BAX inhibitor protein no 0.66
    5 CSW01_04635 methionine ABC transporter substrate-binding protein MetQ no 0.65
    6 CSW01_00560 DNA polymerase I no 0.65
    7 CSW01_09735 LysR family transcriptional regulator no 0.64
    8 CSW01_11785 exonuclease V subunit gamma no 0.64
    9 CSW01_11560 riboflavin biosynthesis protein RibD no 0.63
    10 CSW01_12730 aspartate carbamoyltransferase regulatory subunit no 0.63
    11 CSW01_05490 L-threonylcarbamoyladenylate synthase no 0.63
    12 CSW01_01875 hypothetical protein no 0.62
    13 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.62
    14 CSW01_18935 DUF3541 domain-containing protein no 0.62
    15 CSW01_18155 HAD family hydrolase no 0.62
    16 CSW01_11555 riboflavin synthase no 0.62
    17 CSW01_12605 3-isopropylmalate dehydratase large subunit no 0.62
    18 CSW01_12080 recombinase RecF no 0.62
    19 CSW01_00425 universal stress protein B no 0.62
    20 CSW01_06380 GTP cyclohydrolase II no 0.62

    Or look for negative cofitness