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Cofit
Protein
Homologs
Top cofit genes for CSW01_17025 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_18835
acyl-CoA thioesterase
no
0.68
2
CSW01
_18885
helix-turn-helix transcriptional regulator
no
0.66
3
CSW01
_12860
thiamine/thiamine pyrophosphate ABC transporter permease ThiP
no
0.66
4
CSW01
_06835
BAX inhibitor protein
no
0.66
5
CSW01
_04635
methionine ABC transporter substrate-binding protein MetQ
no
0.65
6
CSW01
_00560
DNA polymerase I
no
0.65
7
CSW01
_09735
LysR family transcriptional regulator
no
0.64
8
CSW01
_11785
exonuclease V subunit gamma
no
0.64
9
CSW01
_11560
riboflavin biosynthesis protein RibD
no
0.63
10
CSW01
_12730
aspartate carbamoyltransferase regulatory subunit
no
0.63
11
CSW01
_05490
L-threonylcarbamoyladenylate synthase
no
0.63
12
CSW01
_01875
hypothetical protein
no
0.62
13
CSW01
_01820
N-acetylmuramoyl-L-alanine amidase
no
0.62
14
CSW01
_18935
DUF3541 domain-containing protein
no
0.62
15
CSW01
_18155
HAD family hydrolase
no
0.62
16
CSW01
_11555
riboflavin synthase
no
0.62
17
CSW01
_12605
3-isopropylmalate dehydratase large subunit
no
0.62
18
CSW01
_12080
recombinase RecF
no
0.62
19
CSW01
_00425
universal stress protein B
no
0.62
20
CSW01
_06380
GTP cyclohydrolase II
no
0.62
Or look for
negative cofitness