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  • Top cofit genes for CSW01_16950 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent endonuclease
    SEED: Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup
    KEGG: putative ATP-dependent endonuclease of the OLD family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.66
    2 CSW01_12260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no 0.65
    3 CSW01_12405 GTP diphosphokinase no 0.65
    4 CSW01_13155 ribonuclease R 0.65 0.58
    5 CSW01_14325 peptidase no 0.57
    6 CSW01_02500 deoxyribonuclease 0.33 0.52
    7 CSW01_14530 SulP family inorganic anion transporter no 0.52
    8 CSW01_02775 glycerol-3-phosphate acyltransferase 0.69 0.51
    9 CSW01_01410 DUF1481 domain-containing protein no 0.51
    10 CSW01_05220 cyclic pyranopterin monophosphate synthase MoaC no 0.47
    11 CSW01_01435 transcriptional regulator CadC 0.48 0.47
    12 CSW01_00985 integrase no 0.47
    13 CSW01_11625 diguanylate cyclase no 0.46
    14 CSW01_05930 tryptophan synthase subunit beta no 0.45
    15 CSW01_09025 transposase no 0.45
    16 CSW01_04820 serine hydroxymethyltransferase no 0.45
    17 CSW01_08850 hypothetical protein no 0.45
    18 CSW01_02100 RNase E specificity factor CsrD no 0.45
    19 CSW01_12900 DUF490 domain-containing protein 0.23 0.44
    20 CSW01_05670 protease HtpX no 0.44

    Or look for negative cofitness