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  • Top cofit genes for CSW01_16940 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Cys regulon transcriptional activator CysB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.69
    2 CSW01_05425 hypothetical protein no 0.68
    3 CSW01_06400 DUF1513 domain-containing protein no 0.68
    4 CSW01_04820 serine hydroxymethyltransferase no 0.68
    5 CSW01_06735 methylisocitrate lyase no 0.67
    6 CSW01_11920 NupC/NupG family nucleoside CNT transporter no 0.65
    7 CSW01_13285 ribulose-phosphate 3-epimerase no 0.65
    8 CSW01_01555 ATP-dependent RNA helicase RhlB no 0.65
    9 CSW01_03215 ABC transporter ATP-binding protein no 0.65
    10 CSW01_05930 tryptophan synthase subunit beta no 0.65
    11 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase no 0.65
    12 CSW01_01485 transcriptional regulator no 0.64
    13 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) no 0.64
    14 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.64
    15 CSW01_11560 riboflavin biosynthesis protein RibD no 0.64
    16 CSW01_06390 thiol oxidoreductase no 0.64
    17 CSW01_15205 HTH-type transcriptional regulator UlaR no 0.64
    18 CSW01_03210 iron ABC transporter permease no 0.64
    19 CSW01_06280 succinylglutamate desuccinylase no 0.64
    20 CSW01_02100 RNase E specificity factor CsrD no 0.63

    Or look for negative cofitness