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  • Top cofit genes for CSW01_15185 from Vibrio cholerae E7946 ATCC 55056

    Cof-type HAD-IIB family hydrolase
    SEED: HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin no 0.63
    2 CSW01_06785 FAA hydrolase family protein no 0.63
    3 CSW01_04035 Fe(3+)-siderophore ABC transporter permease no 0.61
    4 CSW01_18160 hypothetical protein no 0.61
    5 CSW01_18195 DUF3024 domain-containing protein no 0.61
    6 CSW01_18480 PLP-dependent aminotransferase family protein no 0.61
    7 CSW01_09155 PTS fructose transporter subunit IIC no 0.60
    8 CSW01_16035 DUF645 domain-containing protein no 0.60
    9 CSW01_10265 c-type cytochrome biogenesis protein CcmF 0.42 0.59
    10 CSW01_19620 delta-VPH no 0.59
    11 CSW01_08425 envelope stress response membrane protein PspC no 0.59
    12 CSW01_17495 glycerol-3-phosphate dehydrogenase no 0.58
    13 CSW01_18865 spermidine acetyltransferase 0.35 0.57
    14 CSW01_14320 deoxyribodipyrimidine photo-lyase 0.55 0.57
    15 CSW01_02450 pyrroline-5-carboxylate reductase no 0.57
    16 CSW01_09470 hypothetical protein no 0.56
    17 CSW01_11920 NupC/NupG family nucleoside CNT transporter no 0.56
    18 CSW01_07060 TetR/AcrR family transcriptional regulator no 0.56
    19 CSW01_18650 DsbA family protein no 0.55
    20 CSW01_03280 16S rRNA methyltransferase 0.40 0.55

    Or look for negative cofitness