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  • Top cofit genes for CSW01_14650 from Vibrio cholerae E7946 ATCC 55056

    ribose import ATP-binding protein RbsA
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00675 hypothetical protein no 0.57
    2 CSW01_14570 type VI secretion system baseplate subunit TssG 0.22 0.57
    3 CSW01_13180 isoaspartyl peptidase/L-asparaginase 0.16 0.56
    4 CSW01_14945 2-hydroxyacid dehydrogenase 0.42 0.53
    5 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.49 0.52
    6 CSW01_14355 DUF1566 domain-containing protein no 0.49
    7 CSW01_13220 hypothetical protein no 0.47
    8 CSW01_15050 Na+/H+ antiporter no 0.47
    9 CSW01_15165 DNA-binding response regulator no 0.47
    10 CSW01_19585 phosphoethanolamine transferase 0.47 0.47
    11 CSW01_18275 diaminobutyrate--2-oxoglutarate transaminase no 0.46
    12 CSW01_14535 RluA family pseudouridine synthase no 0.46
    13 CSW01_06705 opacity protein-related protein no 0.46
    14 CSW01_18565 L-threonine 3-dehydrogenase 0.35 0.44
    15 CSW01_15015 anaerobic C4-dicarboxylate transporter no 0.44
    16 CSW01_16375 hypothetical protein no 0.44
    17 CSW01_18360 hypothetical protein no 0.44
    18 CSW01_17655 protein translocase subunit SecF no 0.44
    19 CSW01_19290 amino acid ABC transporter permease no 0.43
    20 CSW01_19015 chemotaxis protein no 0.43

    Or look for negative cofitness