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  • Top cofit genes for CSW01_14645 from Vibrio cholerae E7946 ATCC 55056

    D-ribose pyranase
    SEED: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
    KEGG: D-ribose pyranase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17240 2-aminoethylphosphonate--pyruvate aminotransferase no 0.51
    2 CSW01_17670 hypothetical protein no 0.51
    3 CSW01_19370 methyl-accepting chemotaxis protein no 0.50
    4 CSW01_09685 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.49
    5 CSW01_14200 arginase no 0.49
    6 CSW01_15130 AraC family transcriptional regulator no 0.48
    7 CSW01_03050 cytochrome b no 0.48
    8 CSW01_12655 HD-GYP domain-containing protein no 0.47
    9 CSW01_15135 TonB-dependent siderophore receptor no 0.46
    10 CSW01_17450 hypothetical protein no 0.45
    11 CSW01_02230 ribonuclease E inhibitor RraB no 0.45
    12 CSW01_11910 2-deoxyribose-5-phosphate aldolase no 0.45
    13 CSW01_14585 type VI secretion system baseplate subunit TssK no 0.44
    14 CSW01_17260 noncanonical pyrimidine nucleotidase, YjjG family 0.21 0.43
    15 CSW01_17750 cytochrome B no 0.43
    16 CSW01_07205 copper-translocating P-type ATPase no 0.42
    17 CSW01_15255 copper-binding protein no 0.42
    18 CSW01_15105 class II glutamine amidotransferase no 0.42
    19 CSW01_17170 ABC transporter ATP-binding protein 0.52 0.42
    20 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM no 0.42

    Or look for negative cofitness