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  • Top cofit genes for CSW01_14600 from Vibrio cholerae E7946 ATCC 55056

    AAA family ATPase
    SEED: Sigma-54 dependent transcriptional regulator
    KEGG: sigma-54 specific transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17560 DNA-binding response regulator no 0.57
    2 CSW01_07525 Free methionine-(R)-sulfoxide reductase no 0.52
    3 CSW01_19020 ABC transporter no 0.51
    4 CSW01_18330 drug/metabolite DMT transporter permease 0.46 0.49
    5 CSW01_15050 Na+/H+ antiporter no 0.48
    6 CSW01_16795 nucleotide pyrophosphatase no 0.47
    7 CSW01_01375 IclR family transcriptional regulator no 0.45
    8 CSW01_11945 cation-binding protein no 0.44
    9 CSW01_08175 hypothetical protein no 0.43
    10 CSW01_19585 phosphoethanolamine transferase no 0.43
    11 CSW01_09535 alanine dehydrogenase no 0.42
    12 CSW01_11325 DUF3149 domain-containing protein no 0.42
    13 CSW01_07730 CPXCG motif-containing cysteine-rich protein no 0.41
    14 CSW01_15255 copper-binding protein no 0.41
    15 CSW01_06585 fumarate hydratase 0.37 0.41
    16 CSW01_08160 carboxynorspermidine decarboxylase no 0.40
    17 CSW01_17930 thioredoxin TrxC no 0.40
    18 CSW01_13640 DNA-binding response regulator no 0.40
    19 CSW01_12400 nucleoside triphosphate pyrophosphohydrolase no 0.39
    20 CSW01_15130 AraC family transcriptional regulator no 0.39

    Or look for negative cofitness