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  • Top cofit genes for CSW01_14590 from Vibrio cholerae E7946 ATCC 55056

    type IV secretion protein DotU
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03050 cytochrome b no 0.51
    2 CSW01_09015 hypothetical protein no 0.48
    3 CSW01_19355 rhodanese-like domain-containing protein no 0.47
    4 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit no 0.46
    5 CSW01_19250 hypothetical protein no 0.45
    6 CSW01_08120 M48 family peptidase no 0.45
    7 CSW01_14140 type VI secretion system tip protein VgrG no 0.45
    8 CSW01_00530 rhomboid family intramembrane serine protease GlpG no 0.44
    9 CSW01_16475 hypothetical protein no 0.44
    10 CSW01_16695 alpha/beta hydrolase no 0.44
    11 CSW01_18815 AraC family transcriptional regulator no 0.44
    12 CSW01_11585 esterase FrsA 0.58 0.43
    13 CSW01_15260 hypothetical protein no 0.42
    14 CSW01_18085 ABC transporter no 0.42
    15 CSW01_08790 mechanosensitive ion channel protein MscS no 0.42
    16 CSW01_19525 chemoreceptor glutamine deamidase CheD no 0.41
    17 CSW01_14095 methyl-accepting chemotaxis protein no 0.41
    18 CSW01_03145 polynucleotide adenylyltransferase PcnB no 0.40
    19 CSW01_17670 hypothetical protein no 0.40
    20 CSW01_11615 deacylase no 0.39

    Or look for negative cofitness