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  • Top cofit genes for CSW01_14575 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system-associated FHA domain protein TagH
    SEED: Uncharacterized protein ImpI/VasC
    KEGG: type VI secretion system protein ImpI

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14390 GGDEF domain-containing protein no 0.63
    2 CSW01_10045 sodium-dependent transporter no 0.60
    3 CSW01_02710 chemotaxis protein 0.18 0.60
    4 CSW01_14460 dicarboxylate/amino acid:cation symporter no 0.60
    5 CSW01_06420 DUF2982 domain-containing protein no 0.58
    6 CSW01_15920 DUF3265 domain-containing protein no 0.58
    7 CSW01_13965 YigZ family protein no 0.58
    8 CSW01_06740 2-methylcitrate synthase no 0.57
    9 CSW01_16675 N-acetyltransferase no 0.57
    10 CSW01_14215 DUF839 domain-containing protein no 0.56
    11 CSW01_08855 type I restriction endonuclease subunit R no 0.56
    12 CSW01_06780 homogentisate 1,2-dioxygenase no 0.56
    13 CSW01_02650 IS5/IS1182 family transposase no 0.55
    14 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS no 0.54
    15 CSW01_19230 maltoporin no 0.54
    16 CSW01_14555 type VI secretion system contractile sheath large subunit 0.38 0.54
    17 CSW01_08235 DNA-binding response regulator no 0.54
    18 CSW01_14220 HDOD domain-containing protein no 0.54
    19 CSW01_19575 ABC transporter permease no 0.53
    20 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase 0.30 0.53

    Or look for negative cofitness