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  • Top cofit genes for CSW01_14565 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system baseplate subunit TssF
    SEED: Protein ImpG/VasA
    KEGG: type VI secretion system protein ImpG

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19115 AraC family transcriptional regulator no 0.57
    2 CSW01_04940 hypothetical protein no 0.56
    3 CSW01_04075 4,5-dioxygenase no 0.54
    4 CSW01_08945 N-acetylglucosamine-6-phosphate deacetylase no 0.52
    5 CSW01_08565 hypothetical protein no 0.51
    6 CSW01_02680 WYL domain-containing protein no 0.50
    7 CSW01_19065 ATP-dependent helicase no 0.49
    8 CSW01_18260 hypothetical protein no 0.48
    9 CSW01_13580 cation-efflux pump FieF 0.53 0.46
    10 CSW01_16830 bifunctional PTS fructose transporter subunit IIA/HPr protein 0.57 0.46
    11 CSW01_13180 isoaspartyl peptidase/L-asparaginase 0.43 0.45
    12 CSW01_15870 type II toxin-antitoxin system RelE/ParE family toxin no 0.45
    13 CSW01_09940 formyltetrahydrofolate deformylase 0.59 0.45
    14 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.56 0.44
    15 CSW01_18795 cold-shock protein CspV no 0.44
    16 CSW01_09835 benzoate transporter no 0.44
    17 CSW01_19610 biliverdin-producing heme oxygenase no 0.44
    18 CSW01_15780 hypothetical protein no 0.43
    19 CSW01_16395 type II toxin-antitoxin system RelE/ParE family toxin 0.36 0.42
    20 CSW01_14840 aerotolerance protein BatD no 0.42

    Or look for negative cofitness