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  • Top cofit genes for CSW01_14440 from Vibrio cholerae E7946 ATCC 55056

    redox-sensitive transcriptional activator SoxR
    SEED: Redox-sensitive transcriptional activator SoxR
    KEGG: MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15755 hypothetical protein no 0.54
    2 CSW01_04130 citrate lyase subunit alpha no 0.52
    3 CSW01_04515 50S ribosomal protein L36 no 0.51
    4 CSW01_13315 fimbrial protein no 0.51
    5 CSW01_06250 peptide-methionine (R)-S-oxide reductase 0.30 0.50
    6 CSW01_10220 DNA topoisomerase III no 0.49
    7 CSW01_16075 hypothetical protein no 0.49
    8 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein no 0.48
    9 CSW01_09505 DUF1887 domain-containing protein no 0.47
    10 CSW01_05870 DUF945 domain-containing protein no 0.46
    11 CSW01_15455 hypothetical protein no 0.46
    12 CSW01_12960 sulfate adenylyltransferase subunit CysD no 0.46
    13 CSW01_04220 hypothetical protein no 0.46
    14 CSW01_09910 alpha/beta hydrolase 0.24 0.45
    15 CSW01_11355 phosphoribosylglycinamide formyltransferase no 0.45
    16 CSW01_04465 hypothetical protein no 0.45
    17 CSW01_12755 anti-sigma B factor antagonist no 0.44
    18 CSW01_00090 valine--pyruvate transaminase no 0.44
    19 CSW01_06320 competence/damage-inducible protein A no 0.44
    20 CSW01_07875 cytochrome BD ubiquinol oxidase subunit II 0.52 0.44

    Or look for negative cofitness