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  • Top cofit genes for CSW01_14425 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09665 oxidoreductase no 0.51
    2 CSW01_14400 hypothetical protein no 0.48
    3 CSW01_14570 type VI secretion system baseplate subunit TssG no 0.46
    4 CSW01_09765 NupC/NupG family nucleoside CNT transporter no 0.45
    5 CSW01_09475 thiamine kinase no 0.45
    6 CSW01_17375 SAM-dependent methyltransferase no 0.43
    7 CSW01_05015 selenoprotein W-like protein no 0.41
    8 CSW01_16035 DUF645 domain-containing protein no 0.40
    9 CSW01_17545 MFS transporter no 0.40
    10 CSW01_17360 GNAT family acetyltransferase no 0.40
    11 CSW01_13475 DUF3135 domain-containing protein no 0.40
    12 CSW01_16695 alpha/beta hydrolase no 0.40
    13 CSW01_06955 hypothetical protein no 0.40
    14 CSW01_03530 sulfite exporter TauE/SafE family protein no 0.40
    15 CSW01_12905 outer membrane protein assembly factor no 0.40
    16 CSW01_18915 DUF3612 domain-containing protein no 0.39
    17 CSW01_06895 diguanylate cyclase no 0.39
    18 CSW01_07895 class II fumarate hydratase no 0.39
    19 CSW01_15135 TonB-dependent siderophore receptor no 0.39
    20 CSW01_14585 type VI secretion system baseplate subunit TssK no 0.39

    Or look for negative cofitness