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  • Top cofit genes for CSW01_14340 from Vibrio cholerae E7946 ATCC 55056

    S9 family peptidase
    SEED: Protease II (EC 3.4.21.83)
    KEGG: oligopeptidase B

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18410 ABC transporter ATP-binding protein no 0.79
    2 CSW01_14435 MFS transporter no 0.76
    3 CSW01_07835 catalase-peroxidase 0.30 0.76
    4 CSW01_15345 XRE family transcriptional regulator no 0.75
    5 CSW01_14125 1,4-alpha-glucan branching enzyme 0.76 0.75
    6 CSW01_01300 sugar ABC transporter no 0.75
    7 CSW01_14390 GGDEF domain-containing protein no 0.75
    8 CSW01_19490 GGDEF domain-containing protein no 0.75
    9 CSW01_01295 ABC transporter permease no 0.75
    10 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.61 0.75
    11 CSW01_11710 transcriptional regulator no 0.74
    12 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.74
    13 CSW01_01285 perosamine synthetase no 0.73
    14 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.73
    15 CSW01_02440 YggU family protein no 0.73
    16 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.33 0.73
    17 CSW01_09145 PTS fructose transporter subunit IIA no 0.73
    18 CSW01_01345 glycosyl transferase family 1 no 0.73
    19 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.37 0.73
    20 CSW01_01290 rfbG protein no 0.73

    Or look for negative cofitness