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  • Top cofit genes for CSW01_14140 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system tip protein VgrG
    SEED: VgrG-3 protein
    KEGG: type VI secretion system secreted protein VgrG

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_16030 DUF3709 domain-containing protein no 0.67
    2 CSW01_17350 AbrB family transcriptional regulator no 0.57
    3 CSW01_05390 YciK family oxidoreductase 0.41 0.57
    4 CSW01_14290 hypothetical protein no 0.54
    5 CSW01_04160 NAD(P)/FAD-dependent oxidoreductase no 0.53
    6 CSW01_03845 hypothetical protein no 0.53
    7 CSW01_03340 ribosomal RNA large subunit methyltransferase E no 0.53
    8 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase no 0.52
    9 CSW01_16940 LysR family transcriptional regulator no 0.51
    10 CSW01_15260 hypothetical protein no 0.51
    11 CSW01_12710 hypothetical protein no 0.50
    12 CSW01_12855 thiamine ABC transporter ATP-binding protein no 0.50
    13 CSW01_00380 hypothetical protein no 0.50
    14 CSW01_05550 oligopeptide ABC transporter permease OppB no 0.50
    15 CSW01_07120 LysE family translocator no 0.49
    16 CSW01_07255 HlyD family type I secretion periplasmic adaptor subunit no 0.49
    17 CSW01_06875 7-cyano-7-deazaguanine synthase QueC 0.40 0.48
    18 CSW01_02165 MSHA pilin protein MshD no 0.48
    19 CSW01_18750 methyl-accepting chemotaxis protein no 0.48
    20 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no 0.48

    Or look for negative cofitness