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  • Top cofit genes for CSW01_13870 from Vibrio cholerae E7946 ATCC 55056

    sensor domain-containing phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03770 phosphate ABC transporter substrate-binding protein no 0.49
    2 CSW01_13595 two-component system sensor histidine kinase CpxA no 0.47
    3 CSW01_00435 EamA/RhaT family transporter no 0.47
    4 CSW01_06455 DNA-binding response regulator no 0.46
    5 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC no 0.45
    6 CSW01_03225 N,N'-diacetylchitobiose phosphorylase no 0.45
    7 CSW01_16970 alkylphosphonate utilization protein no 0.43
    8 CSW01_03620 beta-hexosaminidase no 0.43
    9 CSW01_17260 noncanonical pyrimidine nucleotidase, YjjG family no 0.43
    10 CSW01_04760 hypothetical protein no 0.43
    11 CSW01_05810 transporter no 0.41
    12 CSW01_04615 hypothetical protein no 0.40
    13 CSW01_17115 SgrR family transcriptional regulator no 0.40
    14 CSW01_13970 fatty acid oxidation complex subunit alpha FadB no 0.39
    15 CSW01_16955 bifunctional metallophosphatase/5'-nucleotidase no 0.39
    16 CSW01_07640 sigma-54-dependent Fis family transcriptional regulator no 0.39
    17 CSW01_04775 polymerase no 0.39
    18 CSW01_13985 Bcr/CflA family drug resistance efflux transporter no 0.39
    19 CSW01_17105 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor no 0.39
    20 CSW01_12715 ribonuclease no 0.38

    Or look for negative cofitness