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  • Top cofit genes for CSW01_13670 from Vibrio cholerae E7946 ATCC 55056

    DNA-directed RNA polymerase subunit omega
    SEED: DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)
    KEGG: DNA-directed RNA polymerase subunit omega

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18805 hypothetical protein no 0.66
    2 CSW01_18925 sensor domain-containing diguanylate cyclase no 0.65
    3 CSW01_18745 AraC family transcriptional regulator no 0.63
    4 CSW01_03880 HTH-type transcriptional regulator IscR 0.50 0.63
    5 CSW01_18970 DUF2850 domain-containing protein no 0.63
    6 CSW01_07025 hypothetical protein no 0.62
    7 CSW01_09090 NYN domain-containing protein 0.40 0.60
    8 CSW01_06035 hypothetical protein no 0.60
    9 CSW01_11240 flagella basal body P-ring formation protein FlgA no 0.60
    10 CSW01_00005 hypothetical protein no 0.60
    11 CSW01_19595 DNA-binding response regulator no 0.60
    12 CSW01_18710 hemin ABC transporter substrate-binding protein no 0.60
    13 CSW01_19010 methyl-accepting chemotaxis protein no 0.59
    14 CSW01_14950 sodium:proton antiporter no 0.59
    15 CSW01_01915 bacterioferritin-associated ferredoxin no 0.59
    16 CSW01_15305 XRE family transcriptional regulator no 0.59
    17 CSW01_14120 4-alpha-glucanotransferase 0.59 0.59
    18 CSW01_10145 ribonuclease E 0.52 0.58
    19 CSW01_10375 HIT family protein no 0.58
    20 CSW01_03270 hypothetical protein no 0.57

    Or look for negative cofitness