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  • Top cofit genes for CSW01_13620 from Vibrio cholerae E7946 ATCC 55056

    aspartate ammonia-lyase
    SEED: Aspartate ammonia-lyase (EC 4.3.1.1)
    KEGG: aspartate ammonia-lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03985 GMP synthase (glutamine-hydrolyzing) 0.30 0.75
    2 CSW01_10190 nucleoid-associated protein 0.61 0.74
    3 CSW01_01355 UDP-glucose 4-epimerase no 0.73
    4 CSW01_08465 ABC transporter ATP-binding protein no 0.73
    5 CSW01_11535 thiamine-phosphate kinase no 0.73
    6 CSW01_11690 hypothetical protein no 0.71
    7 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.60 0.69
    8 CSW01_01190 glycosyltransferase family 2 protein no 0.69
    9 CSW01_11440 ribonuclease HII no 0.69
    10 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.84 0.68
    11 CSW01_04250 toxin coregulated pilus biosynthesis protein I no 0.68
    12 CSW01_02255 C4-dicarboxylate ABC transporter substrate-binding protein no 0.67
    13 CSW01_06780 homogentisate 1,2-dioxygenase no 0.67
    14 CSW01_01255 acyltransferase no 0.67
    15 CSW01_01390 mannose-6-phosphate isomerase, class I no 0.67
    16 CSW01_01350 polysaccharide biosynthesis protein 0.44 0.67
    17 CSW01_10320 chemotaxis protein CheA no 0.67
    18 CSW01_01185 ADP-heptose--LPS heptosyltransferase no 0.66
    19 CSW01_01250 polymerase no 0.66
    20 CSW01_12360 TIGR00153 family protein 0.58 0.66

    Or look for negative cofitness