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  • Top cofit genes for CSW01_13615 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05180 tRNA-Asn no 0.67
    2 CSW01_13470 transcriptional regulator no 0.67
    3 CSW01_11790 C4-dicarboxylate ABC transporter no 0.67
    4 CSW01_14130 hypothetical protein no 0.66
    5 CSW01_17760 DNA helicase IV no 0.65
    6 CSW01_18340 HlyC/CorC family transporter no 0.65
    7 CSW01_19325 MltR family transcriptional regulator no 0.64
    8 CSW01_06075 DUF3581 domain-containing protein no 0.62
    9 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 no 0.61
    10 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no 0.61
    11 CSW01_14475 cobinamide adenolsyltransferase no 0.61
    12 CSW01_10220 DNA topoisomerase III no 0.61
    13 CSW01_08190 ABC transporter permease no 0.61
    14 CSW01_14555 type VI secretion system contractile sheath large subunit no 0.61
    15 CSW01_11100 replication endonuclease no 0.60
    16 CSW01_01175 formamidopyrimidine-DNA glycosylase no 0.60
    17 CSW01_12360 TIGR00153 family protein no 0.60
    18 CSW01_02955 NADP-dependent oxidoreductase no 0.60
    19 CSW01_10985 DUF2590 domain-containing protein no 0.59
    20 CSW01_18645 MBL fold metallo-hydrolase no 0.59

    Or look for negative cofitness