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Cofit
Protein
Homologs
Top cofit genes for CSW01_13615 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_05180
tRNA-Asn
no
0.67
2
CSW01
_13470
transcriptional regulator
no
0.67
3
CSW01
_11790
C4-dicarboxylate ABC transporter
no
0.67
4
CSW01
_14130
hypothetical protein
no
0.66
5
CSW01
_17760
DNA helicase IV
no
0.65
6
CSW01
_18340
HlyC/CorC family transporter
no
0.65
7
CSW01
_19325
MltR family transcriptional regulator
no
0.64
8
CSW01
_06075
DUF3581 domain-containing protein
no
0.62
9
CSW01
_10175
Aspartate-semialdehyde dehydrogenase 1
no
0.61
10
CSW01
_04915
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
no
0.61
11
CSW01
_14475
cobinamide adenolsyltransferase
no
0.61
12
CSW01
_10220
DNA topoisomerase III
no
0.61
13
CSW01
_08190
ABC transporter permease
no
0.61
14
CSW01
_14555
type VI secretion system contractile sheath large subunit
no
0.61
15
CSW01
_11100
replication endonuclease
no
0.60
16
CSW01
_01175
formamidopyrimidine-DNA glycosylase
no
0.60
17
CSW01
_12360
TIGR00153 family protein
no
0.60
18
CSW01
_02955
NADP-dependent oxidoreductase
no
0.60
19
CSW01
_10985
DUF2590 domain-containing protein
no
0.59
20
CSW01
_18645
MBL fold metallo-hydrolase
no
0.59
Or look for
negative cofitness