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  • Top cofit genes for CSW01_13550 from Vibrio cholerae E7946 ATCC 55056

    O-succinylhomoserine (thiol)-lyase
    SEED: Cystathionine gamma-synthase (EC 2.5.1.48)
    KEGG: cystathionine gamma-synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14125 1,4-alpha-glucan branching enzyme 0.71 0.64
    2 CSW01_13630 type II secretion protein no 0.63
    3 CSW01_11695 peptidyl-prolyl cis-trans isomerase 0.40 0.63
    4 CSW01_14390 GGDEF domain-containing protein no 0.63
    5 CSW01_04265 toxin coregulated pilin no 0.63
    6 CSW01_13470 transcriptional regulator no 0.63
    7 CSW01_13975 acetyl-CoA C-acyltransferase FadA no 0.62
    8 CSW01_03250 ABC transporter ATP-binding protein no 0.62
    9 CSW01_13690 two-component system sensor histidine kinase EnvZ 0.49 0.62
    10 CSW01_19575 ABC transporter permease no 0.62
    11 CSW01_07965 LysR family transcriptional regulator 0.33 0.61
    12 CSW01_13525 DNA-binding transcriptional regulator CytR 0.61 0.61
    13 CSW01_13965 YigZ family protein 0.29 0.61
    14 CSW01_13980 LysR family transcriptional regulator 0.89 0.60
    15 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.60
    16 CSW01_03220 phosphonomutase no 0.60
    17 CSW01_14295 lactate dehydrogenase no 0.60
    18 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.86 0.59
    19 CSW01_00620 class I adenylate cyclase no 0.59
    20 CSW01_02255 C4-dicarboxylate ABC transporter substrate-binding protein no 0.59

    Or look for negative cofitness