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  • Top cofit genes for CSW01_13485 from Vibrio cholerae E7946 ATCC 55056

    5-carboxymethyl-2-hydroxymuconate isomerase
    SEED: 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
    KEGG: 5-carboxymethyl-2-hydroxymuconate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09135 PTS fructose transporter subunit IIA no 0.66
    2 CSW01_07970 alpha-acetolactate decarboxylase no 0.65
    3 CSW01_08195 ABC transporter ATP-binding protein no 0.64
    4 CSW01_00900 hypothetical protein no 0.63
    5 CSW01_13555 bifunctional aspartate kinase/homoserine dehydrogenase II no 0.62
    6 CSW01_08800 paraquat-inducible protein B no 0.61
    7 CSW01_01355 UDP-glucose 4-epimerase no 0.61
    8 CSW01_08590 hypothetical protein no 0.60
    9 CSW01_09675 CDP-alcohol phosphatidyltransferase family protein no 0.60
    10 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.36 0.60
    11 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 no 0.59
    12 CSW01_13410 protein-export protein SecB no 0.59
    13 CSW01_13470 transcriptional regulator no 0.58
    14 CSW01_10770 methyl-accepting chemotaxis protein no 0.58
    15 CSW01_04245 2-Cys peroxiredoxin no 0.58
    16 CSW01_10360 peptidase M16 no 0.58
    17 CSW01_13310 type IV pilus secretin PilQ no 0.58
    18 CSW01_11710 transcriptional regulator no 0.58
    19 CSW01_19540 chemotaxis protein CheW no 0.57
    20 CSW01_09505 DUF1887 domain-containing protein no 0.57

    Or look for negative cofitness