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  • Top cofit genes for CSW01_13450 from Vibrio cholerae E7946 ATCC 55056

    EF-P beta-lysylation protein EpmB
    SEED: Lysyl-lysine 2,3-aminomutase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13445 elongation factor P 0.69 0.82
    2 CSW01_13635 thiol:disulfide interchange protein DsbD 0.28 0.80
    3 CSW01_10080 4-amino-4-deoxychorismate lyase no 0.80
    4 CSW01_02140 type II secretion system F family protein no 0.80
    5 CSW01_17675 GGDEF domain-containing protein no 0.79
    6 CSW01_18350 cell division protein DedD no 0.79
    7 CSW01_10285 heme exporter protein CcmB no 0.79
    8 CSW01_03205 iron ABC transporter substrate-binding protein no 0.78
    9 CSW01_03030 cell division protein ZapE 0.65 0.78
    10 CSW01_02125 MSHA biogenesis protein MshM no 0.78
    11 CSW01_08755 DUF1496 domain-containing protein no 0.78
    12 CSW01_05730 inosine/guanosine kinase no 0.78
    13 CSW01_02165 MSHA pilin protein MshD no 0.77
    14 CSW01_00560 DNA polymerase I 0.25 0.77
    15 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.51 0.77
    16 CSW01_14990 hypothetical protein no 0.77
    17 CSW01_02135 MSHA biogenesis protein MshE no 0.77
    18 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD no 0.77
    19 CSW01_02120 pilus (MSHA type) biogenesis protein MshL no 0.77
    20 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.54 0.77

    Or look for negative cofitness