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  • Top cofit genes for CSW01_13340 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding transcriptional regulator OxyR
    SEED: Hydrogen peroxide-inducible genes activator
    KEGG: LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10710 deferrochelatase 0.71 0.87
    2 CSW01_18630 6-phosphogluconolactonase no 0.70
    3 CSW01_07125 sodium:alanine symporter family protein no 0.54
    4 CSW01_10055 PTS glucose transporter subunit IIBC 0.53 0.54
    5 CSW01_18595 VOC family protein 0.50 0.53
    6 CSW01_06780 homogentisate 1,2-dioxygenase no 0.52
    7 CSW01_02875 DNA recombination/repair protein RecA 0.74 0.49
    8 CSW01_13345 glutathione peroxidase 0.31 0.49
    9 CSW01_04350 accessory colonization factor AcfD no 0.49
    10 CSW01_15460 type B-5 chloramphenicol O-acetyltransferase CatB9 no 0.48
    11 CSW01_13620 aspartate ammonia-lyase 0.73 0.48
    12 CSW01_04445 hypothetical protein no 0.47
    13 CSW01_11775 exodeoxyribonuclease V subunit alpha 0.67 0.47
    14 CSW01_02085 UTP--glucose-1-phosphate uridylyltransferase 0.69 0.47
    15 CSW01_07030 chemotaxis response regulator protein-glutamate methylesterase no 0.47
    16 CSW01_05005 epimerase 0.35 0.46
    17 CSW01_10320 chemotaxis protein CheA 0.44 0.46
    18 CSW01_05325 acetyl-CoA C-acyltransferase FadI 0.37 0.46
    19 CSW01_08915 ABC transporter permease no 0.45
    20 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.28 0.45

    Or look for negative cofitness