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  • Top cofit genes for CSW01_13330 from Vibrio cholerae E7946 ATCC 55056

    pilus assembly protein PilM
    SEED: Type IV pilus biogenesis protein PilM
    KEGG: type IV pilus assembly protein PilM

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12010 GGDEF domain-containing protein no 0.61
    2 CSW01_07355 DNA-binding protein no 0.57
    3 CSW01_06895 diguanylate cyclase no 0.55
    4 CSW01_11905 thymidine phosphorylase no 0.55
    5 CSW01_10800 DUF2069 domain-containing protein no 0.54
    6 CSW01_16560 toxin HigB-2 no 0.53
    7 CSW01_17585 periplasmic nitrate reductase electron transfer subunit no 0.52
    8 CSW01_09280 DUF2057 domain-containing protein no 0.52
    9 CSW01_13480 DUF805 domain-containing protein no 0.51
    10 CSW01_04210 hypothetical protein no 0.50
    11 CSW01_00295 hypothetical protein no 0.49
    12 CSW01_02725 methyl-accepting chemotaxis protein no 0.48
    13 CSW01_07280 RstC protein no 0.48
    14 CSW01_08340 ABC transporter permease 0.64 0.48
    15 CSW01_10375 HIT family protein 0.50 0.48
    16 CSW01_07730 CPXCG motif-containing cysteine-rich protein no 0.47
    17 CSW01_02470 LuxR family transcriptional regulator 0.20 0.47
    18 CSW01_03265 peptide ABC transporter substrate-binding protein no 0.46
    19 CSW01_06200 phosphoribosylglycinamide formyltransferase no 0.46
    20 CSW01_11125 hypothetical protein no 0.45

    Or look for negative cofitness